BDgene

SNP Report

Basic Info
Name rs1457466 dbSNP Ensembl
Location chr8:134104396 - 134104396(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.199281
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Zandi, P. P., 2007 G/A FBAT P-value = 0.078, GIST P-value > 0.05 in the initial sam...... FBAT P-value = 0.078, GIST P-value > 0.05 in the initial sample; FBAT P-value = 0.066, GIST P-value = 0.04 in the replication sample More... rs1457466 in the gene desert was marginally associated in th...... rs1457466 in the gene desert was marginally associated in the replication sample by FBAT. It was also associated by GIST, although the opposite allele that was correlated with linkage was found to be overtransmitted by FBAT. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 8q24.22 4(3/0/1)

SNPs in LD with rs1457466 (count: 0) View in gBrowse (chr8:134104396..134104396 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016