SNP Report

Basic Info

Name	rs1393941 dbSNP Ensembl
Location	chr15:100523296 - 100523296(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.0323482
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000284382, ENST00000394113, ENST00000538112, ENST00000558884, ENST00000559023, ENST00000559639, ENST00000560944); non_coding_transcript_variant(ENST00000559023, ENST00000560944)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Jamain, S., 2014		C	French population: P-value=2.5E-05 French population: P-value=2.5E-05	17 SNPs showed a nominal P<5E-05, suggesting these loci may ...... 17 SNPs showed a nominal P<5E-05, suggesting these loci may be associated with vulnerability to early-onset forms of BD. More...	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CERS3	ceramide synthase 3	15q26.3	1(0/0/1)

SNPs in LD with rs1393941 (count: 0) View in gBrowse (chr15:100523296..100523296 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)