SNP Report

Basic Info

Name	rs1324982 dbSNP Ensembl
Location	chr13:98891879 - 98891879(1)
Variant Alleles	T/C
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.284545
Functional Annotation	intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000339416, ENST00000376460, ENST00000427887, ENST00000442173, ENST00000448493, ENST00000627024, ENST00000630992); NMD_transcript_variant(ENST00000339416, ENST00000630992); upstream_gene_variant(ENST00000473165)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Detera-Wadleigh, S. D., 2007			FBAT-e P-value = 0.3152 in NIMH1-2, FBAT-e P-value = 0.7513 ...... FBAT-e P-value = 0.3152 in NIMH1-2, FBAT-e P-value = 0.7513 in NIMH3, FBAT-e P-value = 0.2899 in NIMH4 More...	no significant over-transmission of any alleles was detected no significant over-transmission of any alleles was detected	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
DOCK9	dedicator of cytokinesis 9	13q32.3	1(1/0/0)

SNPs in LD with rs1324982 (count: 0) View in gBrowse (chr13:98891879..98891879 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)