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SNP Report
Name | rs12778366 dbSNP Ensembl | ||
---|---|---|---|
Location | chr10:67883321 - 67883321(1) | ||
Variant Alleles | T/C | ||
Ancestral Allele | T | ||
Minor Allele | C | ||
Minor Allele Frequence | 0.113419 | ||
Functional Annotation | upstream_gene_variant. | ||
Consequence to Transcript | upstream_gene_variant(ENST00000212015, ENST00000432464, ENST00000473922, ENST00000497639) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | YES | ||
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Kishi, T.,2011(a) | For SZ, X2 test:genotype, X2(2df)=1.21, P-value = 0.545;allele, X2(2df)=0.555, P-value = 0.456 | No significant association was observed. | Negative |