SNP Report

Basic Info
Name rs12662030 dbSNP Ensembl
Location chr6:122771130 - 122771130(1)
Variant Alleles A/C
Ancestral Allele A
Minor Allele C
Minor Allele Frequence 0.291534
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Iwayama, Y., 2010 A/C P-value for allele test is 0.0928, p-value for genotype test...... P-value for allele test is 0.0928, p-value for genotype test is 0.2393, p-value is 0.8168 after correction by permutation test. More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FABP7 fatty acid binding protein 7, brain 6q22-q23 1(1/0/0)

SNPs in LD with rs12662030 (count: 2) View in gBrowse (chr6:122765624..122771130 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)