BDgene

SNP Report

Basic Info
Name rs12500759 dbSNP Ensembl
Location chr4:7708153 - 7708153(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.245407
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000329016, ENST00000507866)
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Jamain, S., 2014 T French sample: P-value=7.54E-04, OR=0.66; German sample:Â...... French sample: P-value=7.54E-04, OR=0.66; German sample: P-value=2.76E-03, OR=0.66; Meta-analysis: P-valuemeta=7.40E-06, ORmeta=0.66 More... It showed little evidence for association with BD. It showed little evidence for association with BD. Trend

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SORCS2 sortilin-related VPS10 domain containing receptor 2 4p16.1 5(3/2/0)

SNPs in LD with rs12500759 (count: 0) View in gBrowse (chr4:7708153..7708153 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016