BDgene

SNP Report

Basic Info
Name rs12489404 dbSNP Ensembl
Location chr3:7305011 - 7305011(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.42492
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000357716, ENST00000389335, ENST00000389336, ENST00000402647, ENST00000435689, ENST00000440923, ENST00000448328, ENST00000461677, ENST00000463676, ENST00000467425, ENST00000486284); NMD_transcript_variant(ENST00000389335, ENST00000435689, ENST00000440923, ENST00000467425); non_coding_transcript_variant(ENST00000461677, ENST00000463676)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GRM7 glutamate receptor, metabotropic 7 3p26-p25 3(2/1/0)

SNPs in LD with rs12489404 (count: 0) View in gBrowse (chr3:7305011..7305011 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)