BDgene

SNP Report

Basic Info
Name rs12454936 dbSNP Ensembl
Location chr18:9134440 - 9134440(1)
Variant Alleles C/G
Ancestral Allele C
Minor Allele G
Minor Allele Frequence 0.0752796
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000318388, ENST00000400033, ENST00000465096, ENST00000474740, ENST00000608008); intron_variant(ENST00000578850, ENST00000579126, ENST00000582375); non_coding_transcript_variant(ENST00000578850, ENST00000579126, ENST00000582375); upstream_gene_variant(ENST00000262126, ENST00000400020, ENST00000540578, ENST00000577992, ENST00000581635, ENST00000583081, ENST00000585234)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Xu, C., 2008 not given in the original text not given in the original text No statistically significant association was found between B...... No statistically significant association was found between BD and this SNP of the NDUFV2 gene examined here. More... Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ANKRD12 ankyrin repeat domain 12 18p11.22 Mapped by Literature SNP
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 18p11.22 6(5/1/0)

SNPs in LD with rs12454936 (count: 0) View in gBrowse (chr18:9134440..9134440 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)