SNP Report

Basic Info

Name	rs12185233 dbSNP Ensembl
Location	chrCHR_HSCHR17_2_CTG5:45857906 - 45857906(1)
Variant Alleles	G/A/C
Ancestral Allele	G
Minor Allele	C
Minor Allele Frequence	0.0860623
Functional Annotation	intron_variant; missense_variant; non_coding_transcript_variant; upstream_gene_variant. Polyphen Annotation: benign(ENST00000610319); probably damaging(ENST00000329196, ENST00000621383) SIFT Annotation: deleterious(ENST00000329196, ENST00000610319' target='_blank'>ENST00000610319, ENST00000621383); tolerated(ENST00000610319' target='_blank'>ENST00000610319)
Consequence to Transcript	intron_variant(ENST00000579244, ENST00000579599, ENST00000634876); missense_variant(ENST00000329196); non_coding_transcript_variant(ENST00000579244, ENST00000579599, ENST00000634876); upstream_gene_variant(ENST00000581125, ENST00000628274, ENST00000629948, ENST00000610319, ENST00000610319, ENST00000628274, ENST00000629948, ENST00000630938, ENST00000632082, ENST00000633517, ENST00000621383, ENST00000632082, ENST00000633517, ENST00000633458)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MAPT-AS1	MAPT antisense RNA 1	17q21.31	Mapped by Literature SNP
SPPL2C	signal peptide peptidase like 2C	17q21.31	Mapped by Literature SNP

SNPs in LD with rs12185233 (count: 0) View in gBrowse (chrCHR_HSCHR17_2_CTG5:45857906..45857906 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)