BDgene

SNP Report

Basic Info
Name rs11919197 dbSNP Ensembl
Location chr3:51702328 - 51702328(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.0856629
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000444233, ENST00000457927); intron_variant(ENST00000341333, ENST00000395057, ENST00000415259, ENST00000416589, ENST00000457573, ENST00000463857, ENST00000489026, ENST00000493444, ENST00000611400, ENST00000614067); non_coding_transcript_variant(ENST00000463857, ENST00000489026, ENST00000493444); upstream_gene_variant(ENST00000296479, ENST00000395052, ENST00000464585, ENST00000475478)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GRM2 glutamate receptor, metabotropic 2 3p21.2 1(0/1/0)
TEX264 testis expressed 264 3p21 Mapped by Literature SNP

SNPs in LD with rs11919197 (count: 0) View in gBrowse (chr3:51702328..51702328 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)