BDgene

SNP Report

Basic Info
Name rs11805078 dbSNP Ensembl
Location chr1:116381693 - 116381693(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.0908546
Functional Annotation intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000295598, ENST00000418797, ENST00000488733, ENST00000537345); non_coding_transcript_variant(ENST00000488733); upstream_gene_variant(ENST00000369494, ENST00000369496)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Goldstein, I.,2009 C/T Single SNP association: additive model: FBAT P-value = 0.018...... Single SNP association: additive model: FBAT P-value = 0.0184 More... The SNP was significantly associated with BD only in the add...... The SNP was significantly associated with BD only in the additive mode. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide 1p13 1(1/0/0)

SNPs in LD with rs11805078 (count: 0) View in gBrowse (chr1:116381693..116381693 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)