BDgene

SNP Report

Basic Info
Name rs116719 dbSNP Ensembl
Location chr17:76754249 - 76754249(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.11262
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000363387); intron_variant(ENST00000336509, ENST00000355954, ENST00000585584, ENST00000585958, ENST00000586622, ENST00000588460, ENST00000588670, ENST00000588768, ENST00000590514, ENST00000593181, ENST00000621483); NMD_transcript_variant(ENST00000585584, ENST00000588670, ENST00000588768); non_coding_transcript_variant(ENST00000585958)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
MFSD11 major facilitator superfamily domain containing 11 17q25.1 1(0/1/0)
RNU6-97P RNA, U6 small nuclear 97, pseudogene 17q25.1 Mapped by LD-proxy

SNPs in LD with rs116719 (count: 0) View in gBrowse (chr17:76754249..76754249 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)