SNP Report

Basic Info

Name	rs112389239 dbSNP Ensembl
Location	chr2:75200333 - 75200333(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.0183706
Functional Annotation	upstream_gene_variant.
Consequence to Transcript	upstream_gene_variant(ENST00000305249, ENST00000409848)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Sharp S.I., 2014	A/G		P-value=0.03, OR=0.66, 95%CI=0.45-0.98 P-value=0.03, OR=0.66, 95%CI=0.45-0.98	Significant association was observed. Significant association was observed.	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TACR1	tachykinin receptor 1	2p13.1-p12	3(3/0/0)

SNPs in LD with rs112389239 (count: 0) View in gBrowse (chr2:75200333..75200333 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)