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SNP Report
Name | rs11121029 dbSNP Ensembl | ||
---|---|---|---|
Location | chr1:7816416 - 7816416(1) | ||
Variant Alleles | G/A | ||
Ancestral Allele | G | ||
Minor Allele | A | ||
Minor Allele Frequence | 0.182308 | ||
Functional Annotation | intron_variant; non_coding_transcript_variant. | ||
Consequence to Transcript | intron_variant(ENST00000361923, ENST00000377532, ENST00000451646, ENST00000613533, ENST00000614998); non_coding_transcript_variant(ENST00000451646) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | NO | ||
Overlap with MDD? | YES |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Soria, V.,2010 | X2-tests:allele P-value = 0.769, Model Recessive, genotype P-value = 0.047, OR(95%CI)=0.43 (0.18-1.04) | Significant association was found. | Positive |