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SNP Report
Name | rs1060041 dbSNP Ensembl | ||
---|---|---|---|
Location | chr1:168004738 - 168004738(1) | ||
Variant Alleles | C/T | ||
Ancestral Allele | C | ||
Minor Allele | T | ||
Minor Allele Frequence | 0.167931 | ||
Functional Annotation | NMD_transcript_variant; synonymous_variant. | ||
Consequence to Transcript | NMD_transcript_variant(ENST00000470721); synonymous_variant(ENST00000312263, ENST00000367840, ENST00000367843, ENST00000432587, ENST00000470721) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | YES | ||
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Saito T., 2014 | First-set screening: P-valuecorrected=1, P-value=0.0481, OR=1.21, 95%CI=1.00-1.46 | Significant association was observed. | Positive |