SNP Report

Basic Info

Name	rs1059016 dbSNP Ensembl
Location	chr5:115392107 - 115392107(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele Frequence	0.0
Functional Annotation	non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript	non_coding_transcript_exon_variant(ENST00000515849); non_coding_transcript_variant(ENST00000515849)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Hattori, E.,2009			In GWAS: Allelic P-value = 0.00488, Genotypic P-value = 0.01...... In GWAS: Allelic P-value = 0.00488, Genotypic P-value = 0.0135, Recessive P-value = 0.01208, HWE P-value = 0.85374; in Follow-up study: MAF=0.17, Allelic P-value = 0.00512, Allelic Q-value=0.49274, HWE P-value = 0.23017 More...	Significant association was observed in both GWAS and Follow...... Significant association was observed in both GWAS and Follow-up study. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PCDH15	protocadherin-related 15	10q21.1	4(2/1/1)

SNPs in LD with rs1059016 (count: 0) View in gBrowse (chr5:115392107..115392107 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)