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SNP Report
Basic Info
| Name | rs10491929 dbSNP Ensembl | ||
|---|---|---|---|
| Location | chr9:74523025 - 74523025(1) | ||
| Variant Alleles | T/C | ||
| Ancestral Allele | T | ||
| Minor Allele | C | ||
| Minor Allele Frequence | 0.245607 | ||
| Functional Annotation | intron_variant. | ||
| Consequence to Transcript | intron_variant(ENST00000376896) | ||
| No. of Studies | 1 (Positive: 1; Negative: 0; Trend: 0) | ||
| Source | Literature | ||
| Overlap with SZ? | YES | ||
| Overlap with MDD? | NO | ||
SNP related studies (count: 1)
SNP related genes (count: 1)
| Approved Symbol | Approved Name | Location | No. of Studies (Positive/Negative/Trend)  |
|---|---|---|---|
| RORB | RAR-related orphan receptor B | 9q22 | 4(3/1/0) |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 9)
Overlap with SZ from cross-disorder studies (count: 1)
| Reference | Statistical Result | Description | Result Category |
|---|---|---|---|
| Mansour, H. A.,2009 | Single SNP-based analyses:Trends test P-value = 0.023 in SZ | Significant association was observed | Positive |
Overlap with MDD from cross-disorder studies (count: 0)