BDgene

SNP Report

Basic Info
Name rs10260011 dbSNP Ensembl
Location chr7:85080040 - 85080040(1)
Variant Alleles C/T
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.471246
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000284136, ENST00000444867)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Kuo, P. H., 2014 P-value=0.01226, OR=1.4, 95%CI=1.1-1.8 for the second stage P-value=0.01226, OR=1.4, 95%CI=1.1-1.8 for the second stage The marker is identified to be associated with bipolar disor...... The marker is identified to be associated with bipolar disorder in the fine-mapping stage with P-value less than 0.05. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 7q21.11 1(1/0/0)

SNPs in LD with rs10260011 (count: 0) View in gBrowse (chr7:85080040..85080040 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)