BDgene

SNP Report

Basic Info
Name rs10009030 dbSNP Ensembl
Location chr4:186599883 - 186599883(1)
Variant Alleles C/A
Ancestral Allele C
Minor Allele A
Minor Allele Frequence 0.284744
Functional Annotation downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000503253); intron_variant(ENST00000441802, ENST00000614102); upstream_gene_variant(ENST00000500085, ENST00000507105, ENST00000507662, ENST00000509537, ENST00000509927, ENST00000512347, ENST00000512772)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Abou Jamra, R, 2008 (a) A/C allelic P-value = 0.01498; OR=1.50 allelic P-value = 0.01498; OR=1.50 showed association with bipolar affective disorder showed association with bipolar affective disorder Positive

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CD36 CD36 molecule (thrombospondin receptor) 7q11.2 3(2/1/0)
FAT1 FAT atypical cadherin 1 4q35.2 Mapped by Literature SNP

SNPs in LD with rs10009030 (count: 0) View in gBrowse (chr4:186599883..186599883 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)