Gene Report

ADD to My Gene Set

Basic Info

Approved Symbol	TULP4
Symbol Alias	TUSP, KIAA1397
Approved Name	tubby like protein 4
Location	6q25-q26
Position	chr6:158232236-158511828, 1
External Links	HGNC: 15530 Entrez Gene: 56995 Ensembl: ENSG00000130338 UCSC: uc003qrf.3
No. of Studies	1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ?	NO
Overlap with MDD?	NO

Gene related studies (count: 1)

Reference	Tested Markers	Statistical Values/Author Comments	Result Category	Comment on Study
Johnson, C.,2009		Monte-Carlo Simulation P-value = 0.0003. One of Genes That Harbor Overlapping Clusters of 4 Nominally Positive SNPs Whose Allele Frequencies Distinguish Individuals With Bipolar Disorder From Controls With P<0.05 Nominal Significance From at Least Three of the Four Samples in This Analysis	Positive	Comment on Study

Gene functional annotation

Gene related GO terms (count: 6)

ID	Name	Type	Evidence[PMID]	No. of Genes in BDgene
GO:0003700	sequence-specific DNA binding transcription factor activity	molecular function	NAS[11595174]	66

ID	Name	Type	Evidence[PMID]	No. of Genes in BDgene
GO:0007584	response to nutrient	biological process	TAS[8612280]	10
GO:0005737	cytoplasm	cellular component	IDA[11595174]	322
GO:0035556	intracellular signal transduction	biological process	IEA	38
GO:0006355	regulation of transcription, DNA-templated	biological process	NAS[11595174]	62
GO:0016567	protein ubiquitination	biological process	IEA	18

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Region Name	Position	No. of Studies (Positive/Negative/Trend)
Chr 6	chr6:0-170805979	3 (0/3/0)
6q25.3	chr6:155200000-160600000	2 (0/1/1)
6q25	chr6:148500000-160600000	2 (0/1/1)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)

Gene relationship with SZ

Gene relationship with MDD

View in gBrowse

Region: chr6:158232236..158511828 View in gBrowse