BDgene

Gene Report

Basic Info
Approved Symbol METTL21C
Previous Symbol C13orf39
Symbol Alias LOC196541
Approved Name methyltransferase like 21C
Previous Name chromosome 13 open reading frame 39
Location 13q33.1
Position chr13:102685744-102694504, -1
External Links HGNC: 33717
Entrez Gene: 196541
Ensembl: ENSG00000139780
UCSC: uc001vpj.4
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Hattori, E.,2009 SNP: rs3885617 After the two-stage analysis, markers in this gene remained nominally significant (allelic P<0.05) with the same allele being consistently over-represented in both the first and the follow-up stages. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 5)

GO terms by PBA (count: 1)

GO terms by database search (count: 4)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 2)

Literature-origin SNPs (count: 1)

LD-proxies (count: 1)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 4)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

View in gBrowse

Region: chr13:102685744..102694504 View in gBrowse
View in gBrowse