BDgene

SNP Report

Basic Info
Name rs9981892 dbSNP Ensembl
Location chr21:46347094 - 46347094(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.161142
Functional Annotation intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000359568, ENST00000466474, ENST00000480896, ENST00000490468); non_coding_transcript_variant(ENST00000466474, ENST00000480896, ENST00000490468); upstream_gene_variant(ENST00000483844)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Anitha, A., 2008 G/A Genotypic P-value = 0.56, allelic P-value = 0.491 for BD whe...... Genotypic P-value = 0.56, allelic P-value = 0.491 for BD when compared with controls. More... none of the SNPs analyzed in our study showed a significant ...... none of the SNPs analyzed in our study showed a significant association with bipolar disorder More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PCNT pericentrin 21q22.3 1(0/1/0)

SNPs in LD with rs9981892 (count: 0) View in gBrowse (chr21:46347094..46347094 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)