BDgene

SNP Report

Basic Info
Name rs979455 dbSNP Ensembl
Location chr5:151215241 - 151215241(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.269569
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000519740); intron_variant(ENST00000355417, ENST00000521308, ENST00000523466); non_coding_transcript_variant(ENST00000521308); upstream_gene_variant(ENST00000522179)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CCDC69 coiled-coil domain containing 69 5q33.1 1(1/0/0)
GM2A GM2 ganglioside activator 5q33.1 Mapped by Literature SNP

SNPs in LD with rs979455 (count: 0) View in gBrowse (chr5:151215241..151215241 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)