BDgene

SNP Report

Basic Info
Name rs903501 dbSNP Ensembl
Location chr17:39683240 - 39683240(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.423922
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000584856); intron_variant(ENST00000300658, ENST00000309862, ENST00000378011, ENST00000429199, ENST00000577337, ENST00000579146, ENST00000580898, ENST00000582276, ENST00000584620, ENST00000619169); NMD_transcript_variant(ENST00000577337, ENST00000584620); non_coding_transcript_variant(ENST00000309862, ENST00000580898, ENST00000582276); upstream_gene_variant(ENST00000578199, ENST00000584014, ENST00000584601, LRG_724t1, LRG_724t3, LRG_724t4)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ERBB2 erb-b2 receptor tyrosine kinase 2 17q11.2-q12 Mapped by LD-proxy
PGAP3 post-GPI attachment to proteins 3 17q21.2 Mapped by LD-proxy

SNPs in LD with rs903501 (count: 0) View in gBrowse (chr17:39683240..39683240 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)