BDgene

SNP Report

Basic Info
Name rs879048 dbSNP Ensembl
Location chr11:27617387 - 27617387(1)
Variant Alleles C/A
Ancestral Allele A
Minor Allele C
Minor Allele Frequence 0.32488
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000527083, ENST00000534757); intron_variant(ENST00000499008, ENST00000499568, ENST00000500662, ENST00000501176, ENST00000502161, ENST00000530686, ENST00000532965); non_coding_transcript_variant(ENST00000499008, ENST00000499568, ENST00000500662, ENST00000501176, ENST00000502161, ENST00000530686, ENST00000532965)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
LINC00678 long intergenic non-protein coding RNA 678 11p14.1 Mapped by LD-proxy
BDNF-AS BDNF antisense RNA 11p14.1 Mapped by Literature SNP

SNPs in LD with rs879048 (count: 0) View in gBrowse (chr11:27617387..27617387 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)