||chr12:89350144 - 89350144(1)
|Minor Allele Frequence
||downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
|Consequence to Transcript
||downstream_gene_variant(ENST00000548755); intron_variant(ENST00000279488, ENST00000308385, ENST00000547140, ENST00000547291); non_coding_transcript_variant(ENST00000547140); upstream_gene_variant(ENST00000611513)
|No. of Studies
||1 (Positive: 1; Negative: 0; Trend: 0)
|Overlap with SZ?
|Overlap with MDD?
SNP related studies (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
SNP related genes (count: 1)
Literature-origin SNPs (count: 0)
LD-proxies (count: 6)
Overlap with SZ from cross-disorder studies (count: 1)
|Kim, S. H., 2012 (a)
||chi-square P-value = 0.6096, Permutation P-value = 0.9485, X2=0.2607, OR=1.205; chi-square P-value = 0.4105, Permutation P-value = 0.8111, X2=0.6775, OR=1.648 for female subjects, chi-square P-value = 0.8973, Permutation P-value = 1, X2=0.0167, OR=0.9427 for male subjects
||showed nominally significant allelic associations with BD, but not with SPR, in female patients
Overlap with MDD from cross-disorder studies (count: 0)