SNP Report

Basic Info

Name	rs659445 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_QBL_CTG1:31886906 - 31886906(1)
Variant Alleles	A/G
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.175919
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000375527); intron_variant(ENST00000375528, ENST00000375530, ENST00000375537, ENST00000395728, ENST00000465429); non_coding_transcript_variant(ENST00000465429); upstream_gene_variant(ENST00000452202, ENST00000452323, ENST00000463484, ENST00000469372, ENST00000480912, ENST00000497706, ENST00000415323, ENST00000421926, ENST00000440987, ENST00000450323, ENST00000476424, ENST00000476424, ENST00000466439, ENST00000498185, ENST00000441555, ENST00000420874, ENST00000436403, ENST00000443951, ENST00000450075, ENST00000495902, ENST00000495902, ENST00000418584, ENST00000431247, ENST00000495133, ENST00000497104, ENST00000498138, ENST00000614291, ENST00000618254, ENST00000458242, ENST00000420930, ENST00000428442, ENST00000429506, ENST00000450229, ENST00000480410, ENST00000480410, ENST00000433109, ENST00000449738, ENST00000475544, ENST00000484009, ENST00000497361, ENST00000612228, ENST00000618948, ENST00000432044, ENST00000420336, ENST00000427405, ENST00000446303, ENST00000454705, ENST00000475991, ENST00000475991, ENST00000414609, ENST00000432285, ENST00000462925, ENST00000467139, ENST00000476210, ENST00000613837, ENST00000615380, ENST00000375525, ENST00000383372, ENST00000383373, ENST00000400006, ENST00000400008, ENST00000469681, ENST00000489833, ENST00000494285, ENST00000469681, ENST00000489833, ENST00000494285, ENST00000411885, ENST00000439426, ENST00000489229, ENST00000497867, ENST00000615801, ENST00000621558)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
C2	complement component 2	6p21.3	Mapped by LD-proxy
ZBTB12	zinc finger and BTB domain containing 12	6p21.31	Mapped by LD-proxy
EHMT2	euchromatic histone-lysine N-methyltransferase 2	6p21.3	Mapped by Literature SNP

SNPs in LD with rs659445 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_QBL_CTG1:31886906..31886906 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)