SNP Report

Basic Info

Name	rs6539116 dbSNP Ensembl
Location	chr12:103998039 - 103998039(1)
Variant Alleles	G/T
Ancestral Allele	G
Minor Allele	T
Minor Allele Frequence	0.228435
Functional Annotation	downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000546851, ENST00000550816); intron_variant(ENST00000360814, ENST00000546436, ENST00000548660); upstream_gene_variant(ENST00000552572)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GLT8D2	glycosyltransferase 8 domain containing 2	12q23.3	Mapped by LD-proxy

SNPs in LD with rs6539116 (count: 0) View in gBrowse (chr12:103998039..103998039 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)