SNP Report

Basic Info

Name	rs644045 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_SSTO_CTG1:31908883 - 31908883(1)
Variant Alleles	G/A
Ancestral Allele	A
Minor Allele	A
Minor Allele Frequence	0.19349
Functional Annotation	intron_variant; upstream_gene_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000452202, ENST00000452323, ENST00000469372, ENST00000497706); upstream_gene_variant(ENST00000411571, ENST00000413154, ENST00000484636, ENST00000418584, ENST00000431247, ENST00000498138, ENST00000614291, ENST00000618254); non_coding_transcript_variant(ENST00000498138, ENST00000458410, ENST00000462325, ENST00000488666, ENST00000433109, ENST00000449738, ENST00000475544, ENST00000612228, ENST00000618948, ENST00000475544, ENST00000435596, ENST00000469696, ENST00000484901, ENST00000414609, ENST00000432285, ENST00000476210, ENST00000613837, ENST00000615380, ENST00000476210, ENST00000458436, ENST00000479385, ENST00000493064, ENST00000411885, ENST00000439426, ENST00000489229, ENST00000489833, ENST00000615801, ENST00000621558, ENST00000489229, ENST00000489833, ENST00000411830, ENST00000464303, ENST00000495226, ENST00000446097, ENST00000466858, ENST00000497736)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
C2	complement component 2	6p21.3	Mapped by LD-proxy

SNPs in LD with rs644045 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_SSTO_CTG1:31908883..31908883 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)