SNP Report

Basic Info

Name	rs6425778 dbSNP Ensembl
Location	chr1:31669421 - 31669421(1)
Variant Alleles	T/A
Ancestral Allele	T
Minor Allele	A
Minor Allele Frequence	0.46905
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000458715); intron_variant(ENST00000373672, ENST00000468459, ENST00000479100, ENST00000488128); non_coding_transcript_variant(ENST00000468459, ENST00000479100, ENST00000488128); upstream_gene_variant(ENST00000440437, ENST00000470799, ENST00000482910)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
COL16A1	collagen, type XVI, alpha 1	1p35-p34	Mapped by LD-proxy

SNPs in LD with rs6425778 (count: 0) View in gBrowse (chr1:31669421..31669421 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)