SNP Report

Basic Info

Name	rs5989681 dbSNP Ensembl
Location	chrX:1614999 - 1614999(1)
Variant Alleles	C/G
Ancestral Allele	G
Minor Allele	C
Minor Allele Frequence	0.406749
Functional Annotation	upstream_gene_variant.
Consequence to Transcript	upstream_gene_variant(ENST00000381229, ENST00000381233, ENST00000381241)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Etain, B.,2012		G	Allele association analysis: for French sample, P(value(Pc)=...... Allele association analysis: for French sample, P(value(Pc)=0.05(0.13), OR[95%CI]=1.27[1.00-1.60]; for German sample, P(value(Pc)=0.07(0.27), OR[95%CI]=1.2[0.99-1.46]; meta P(value=0.008, OR[95%CI]=1.23[1.06-1.42], Q=0.73 More...	Significant association was observed in BD. Significant association was observed in BD.	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ASMT	acetylserotonin O-methyltransferase	Xp22.3 and Yp11.3	1(1/0/0)

SNPs in LD with rs5989681 (count: 0) View in gBrowse (chrX:1614999..1614999 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)