SNP Report

Basic Info

Name	rs537160 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_SSTO_CTG1:31941277 - 31941277(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.244808
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000299367, ENST00000375425, ENST00000375429, ENST00000383177, ENST00000442278, ENST00000444811, ENST00000452323, ENST00000460718, ENST00000468407, ENST00000469372, ENST00000472581, ENST00000475617, ENST00000481121, ENST00000482060, ENST00000485690, ENST00000486124, ENST00000488426, ENST00000492185, ENST00000497706); intron_variant(ENST00000425368, ENST00000452035, ENST00000456570, ENST00000461483, ENST00000465750, ENST00000477310, ENST00000482886, ENST00000497841, LRG_136t1); non_coding_transcript_variant(ENST00000452035, ENST00000461483, ENST00000465750, ENST00000482886, ENST00000497841); upstream_gene_variant(ENST00000467150, ENST00000467360, ENST00000482312, ENST00000483004, ENST00000498317, ENST00000416252, ENST00000419062, ENST00000429857, ENST00000459734, ENST00000461900, ENST00000463283, ENST00000469807, ENST00000482418, ENST00000484113, ENST00000485782, ENST00000498138, ENST00000550363, ENST00000551081, ENST00000614291, ENST00000618254, ENST00000417261, ENST00000427888, ENST00000474773, ENST00000484015, ENST00000486718, ENST00000490040, ENST00000474773, ENST00000484015, ENST00000486718, ENST00000490040, ENST00000463368, ENST00000477453, ENST00000478409, ENST00000480285, ENST00000383174, ENST00000413548, ENST00000423826, ENST00000472314, ENST00000474621, ENST00000475544, ENST00000477630, ENST00000483332, ENST00000485872, ENST00000494049, ENST00000495674, ENST00000549997, ENST00000550682, ENST00000612228, ENST00000618948, ENST00000433503, ENST00000455591, ENST00000469094, ENST00000475203, ENST00000477655, ENST00000487665, ENST00000469094, ENST00000475203, ENST00000477655, ENST00000487665, ENST00000465106, ENST00000476879, ENST00000481375, ENST00000494916, ENST00000375510, ENST00000383359, ENST00000461569, ENST00000484209, ENST00000485544, ENST00000489605, ENST00000491097, ENST00000491566, ENST00000548250, ENST00000548828, ENST00000548995, ENST00000375443, ENST00000375455, ENST00000463942, ENST00000477842, ENST00000487158, ENST00000498489, ENST00000463942, ENST00000477842, ENST00000487158, ENST00000498489, ENST00000479302, ENST00000487765, ENST00000428140, ENST00000448206, ENST00000448628, ENST00000460487, ENST00000463500, ENST00000473139, ENST00000474222, ENST00000476210, ENST00000485098, ENST00000489768, ENST00000494485, ENST00000551648, ENST00000552638, ENST00000613837, ENST00000615380, ENST00000424727, ENST00000436692, ENST00000472676, ENST00000481722, ENST00000482919, ENST00000498577, ENST00000472676, ENST00000481722, ENST00000482919, ENST00000498577, ENST00000468339, ENST00000471848, ENST00000481293, ENST00000484102, ENST00000383343, ENST00000383362, ENST00000383367, ENST00000465211, ENST00000466654, ENST00000466838, ENST00000472489, ENST00000486761, ENST00000489229, ENST00000490080, ENST00000496691, ENST00000547984, ENST00000548973, ENST00000615801, ENST00000621558, ENST00000399981, ENST00000419920, ENST00000461626, ENST00000480498, ENST00000480761, ENST00000489833, ENST00000496304, ENST00000461626, ENST00000480498, ENST00000480761, ENST00000489833, ENST00000496304, ENST00000465480, ENST00000472538, ENST00000479416, ENST00000485948, ENST00000411803, ENST00000452763, ENST00000457397, ENST00000459932, ENST00000460958, ENST00000472803, ENST00000475920, ENST00000482784, ENST00000490020, ENST00000491080, ENST00000492777, ENST00000548500, ENST00000549972, ENST00000550045, ENST00000419411, ENST00000426239, ENST00000462530, ENST00000474638, ENST00000485663, ENST00000492504, ENST00000462530, ENST00000474638, ENST00000485663, ENST00000492504, ENST00000483747, ENST00000486534, ENST00000491218, ENST00000498766)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
C2	complement component 2	6p21.3	Mapped by LD-proxy
NELFE	negative elongation factor complex member E	6p21.3	Mapped by Literature SNP

SNPs in LD with rs537160 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_SSTO_CTG1:31941277..31941277 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)