BDgene

SNP Report

Basic Info
Name rs4998907 dbSNP Ensembl
Location chr6:3266029 - 3266029(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.232827
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000473000); downstream_gene_variant(ENST00000406686, ENST00000436008); intron_variant(ENST00000324987, ENST00000380305, ENST00000380306, ENST00000419065, ENST00000438998, ENST00000451246, ENST00000454610, ENST00000509933); NMD_transcript_variant(ENST00000324987, ENST00000509933)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PSMG4 proteasome (prosome, macropain) assembly chaperone 4 6p25.2 1(0/1/0)
SLC22A23 solute carrier family 22, member 23 6p25.2 1(1/0/0)

SNPs in LD with rs4998907 (count: 0) View in gBrowse (chr6:3266029..3266029 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)