SNP Report

Basic Info

Name	rs4959786 dbSNP Ensembl
Location	chr6:3264253 - 3264253(1)
Variant Alleles	T/A/C
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.383986
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; intron_variant; missense_variant; NMD_transcript_variant. Polyphen Annotation: benign(ENST00000419065) SIFT Annotation: tolerated - low confidence(ENST00000419065)
Consequence to Transcript	3_prime_UTR_variant(ENST00000324987, ENST00000473000); downstream_gene_variant(ENST00000436008); intron_variant(ENST00000380305, ENST00000380306, ENST00000438998, ENST00000451246, ENST00000454610, ENST00000509933); missense_variant(ENST00000419065); NMD_transcript_variant(ENST00000324987, ENST00000509933)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PSMG4	proteasome (prosome, macropain) assembly chaperone 4	6p25.2	1(0/1/0)
SLC22A23	solute carrier family 22, member 23	6p25.2	1(1/0/0)

SNPs in LD with rs4959786 (count: 0) View in gBrowse (chr6:3264253..3264253 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)