SNP Report

Basic Info

Name	rs4916424 dbSNP Ensembl
Location	chr3:196291847 - 196291847(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.426318
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000325318, ENST00000426563, ENST00000431391, ENST00000446494, ENST00000465757, ENST00000491186); NMD_transcript_variant(ENST00000426563, ENST00000431391, ENST00000446494); non_coding_transcript_variant(ENST00000465757, ENST00000491186); upstream_gene_variant(ENST00000292823, ENST00000411591, ENST00000412869, ENST00000431016, ENST00000438634, ENST00000441879, ENST00000443555, ENST00000444822, ENST00000460677, ENST00000473978, ENST00000491544)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PCYT1A	phosphate cytidylyltransferase 1, choline, alpha	3q29	Mapped by Literature SNP
TCTEX1D2	Tctex1 domain containing 2	3q29	1(0/1/0)

SNPs in LD with rs4916424 (count: 0) View in gBrowse (chr3:196291847..196291847 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)