SNP Report

Basic Info

Name	rs4886571 dbSNP Ensembl
Location	chr15:78541416 - 78541416(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.255791
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000408962, ENST00000563233, ENST00000569878, ENST00000623556); intron_variant(ENST00000044462, ENST00000413382, ENST00000557929, ENST00000558281, ENST00000558341, ENST00000558635, ENST00000558639, ENST00000559082, ENST00000559146, ENST00000559365, ENST00000559437, ENST00000559948, ENST00000560033, ENST00000560217); non_coding_transcript_exon_variant(ENST00000559934, ENST00000560099); non_coding_transcript_variant(ENST00000557929, ENST00000558635, ENST00000558639, ENST00000559934, ENST00000560033, ENST00000560099); upstream_gene_variant(ENST00000558094, ENST00000559154, ENST00000559906, ENST00000560737, ENST00000560842)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PSMA4	proteasome (prosome, macropain) subunit, alpha type, 4	15q24.1	Mapped by Literature SNP
HYKK	hydroxylysine kinase	15q25.1	Mapped by LD-proxy

SNPs in LD with rs4886571 (count: 0) View in gBrowse (chr15:78541416..78541416 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)