SNP Report

Basic Info

Name	rs486416 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_SSTO_CTG1:31880980 - 31880980(1)
Variant Alleles	A/G
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.176318
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000434689, ENST00000463484); intron_variant(ENST00000375528, ENST00000375530, ENST00000375537, ENST00000395728, ENST00000480912); non_coding_transcript_variant(ENST00000480912); upstream_gene_variant(ENST00000436026, ENST00000461880, ENST00000477678, ENST00000478491, ENST00000494816, ENST00000441686, ENST00000466439, ENST00000415323, ENST00000421926, ENST00000440987, ENST00000450323, ENST00000498185, ENST00000498185, ENST00000448415, ENST00000488695, ENST00000488847, ENST00000495638, ENST00000495740, ENST00000448488, ENST00000495133, ENST00000420874, ENST00000436403, ENST00000443951, ENST00000450075, ENST00000497104, ENST00000497104, ENST00000420623, ENST00000459733, ENST00000477385, ENST00000479567, ENST00000481372, ENST00000458196, ENST00000484009, ENST00000420930, ENST00000428442, ENST00000429506, ENST00000450229, ENST00000497361, ENST00000497361, ENST00000451745, ENST00000469160, ENST00000471633, ENST00000478077, ENST00000490503, ENST00000419289, ENST00000462925, ENST00000420336, ENST00000427405, ENST00000446303, ENST00000454705, ENST00000467139, ENST00000467139, ENST00000424396, ENST00000478205, ENST00000478629, ENST00000484911, ENST00000495830, ENST00000454059, ENST00000497867, ENST00000383372, ENST00000383373, ENST00000400006, ENST00000400008, ENST00000469681, ENST00000489833, ENST00000469681, ENST00000489833, ENST00000419454, ENST00000465456, ENST00000465594, ENST00000466693, ENST00000470058, ENST00000416010, ENST00000425250, ENST00000458593, ENST00000487513, ENST00000627114, ENST00000629838, ENST00000487513, ENST00000447162, ENST00000465316, ENST00000465622, ENST00000479426, ENST00000497839)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
EHMT2-AS1	EHMT2 antisense RNA 1	6p21.33	Mapped by Literature SNP
EHMT2	euchromatic histone-lysine N-methyltransferase 2	6p21.3	Mapped by Literature SNP

SNPs in LD with rs486416 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_SSTO_CTG1:31880980..31880980 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)