SNP Report

Basic Info
Name rs4764470 dbSNP Ensembl
Location chr12:19189219 - 19189219(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele A
Minor Allele Frequence 0.381789
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000299275, ENST00000429027, ENST00000535357, ENST00000538034, ENST00000538714, ENST00000539256, ENST00000540972); non_coding_transcript_variant(ENST00000535357, ENST00000538034)
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Jamain, S., 2014 A French sample: P-value=2.55E-04, OR=1.53; German sample:Â...... French sample: P-value=2.55E-04, OR=1.53; German sample: P-value=1.84E-02, OR=1.39; Meta-analysis: P-valuemeta=1.73E-05, ORmeta=1.47 More... This SNP showed a difference in allele frequencies at P<5E-0...... This SNP showed a difference in allele frequencies at P<5E-05. More... Trend

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
AEBP2 AE binding protein 2 12p12.3 1(1/0/0)
PLEKHA5 pleckstrin homology domain containing, family A member 5 12p12 1(1/0/0)

SNPs in LD with rs4764470 (count: 0) View in gBrowse (chr12:19189219..19189219 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)