SNP Report

Basic Info

Name	rs4392119 dbSNP Ensembl
Location	chr17:30238345 - 30238345(1)
Variant Alleles	T/C
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.0107827
Functional Annotation	upstream_gene_variant.
Consequence to Transcript	upstream_gene_variant(ENST00000261707, ENST00000394821, ENST00000401766, ENST00000577420)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Alaerts, M.,2009	C/T		Allelic association P-value = 1.00; Genotypic association P-...... Allelic association P-value = 1.00; Genotypic association P-value = 1.00 More...	No significant association was observed No significant association was observed	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SLC6A4	solute carrier family 6 (neurotransmitter transporter), member 4	17q11.2	44(18/26/0)

SNPs in LD with rs4392119 (count: 0) View in gBrowse (chr17:30238345..30238345 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)