BDgene

SNP Report

Basic Info
Name rs4294864 dbSNP Ensembl
Location chr17:30113120 - 30113120(1)
Variant Alleles G/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.45647
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000394835, ENST00000419434, ENST00000586878, ENST00000588978, ENST00000637796); intron_variant(ENST00000582938); non_coding_transcript_variant(ENST00000582938); upstream_gene_variant(ENST00000247026, ENST00000362201, ENST00000394826, ENST00000467446, ENST00000475652, ENST00000479218, ENST00000540900, ENST00000577289, ENST00000580103, ENST00000581048, ENST00000583301, ENST00000584154, ENST00000584317, ENST00000584423, ENST00000585881, ENST00000588614, ENST00000589608, ENST00000612959)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NSRP1 nuclear speckle splicing regulatory protein 1 17q11.2 Mapped by Literature SNP
MIR3184 microRNA 3184 17 Mapped by LD-proxy
EFCAB5 EF-hand calcium binding domain 5 17q11.2 Mapped by Literature SNP

SNPs in LD with rs4294864 (count: 0) View in gBrowse (chr17:30113120..30113120 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)