SNP Report

Basic Info

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Chen, X., 2015	A/G		P-value=2.39E-26,Â OR=0.34, 95%CI=0.28-0.42 P-value=2.39E-26,Â OR=0.34, 95%CI=0.28-0.42	Chromosome 7 associated SNPs and flanking genes for bipolar ...... Chromosome 7 associated SNPs and flanking genes for bipolar disorder (BPD) from Affymetrix Genome-wide Human SNP Array 6.0 in the population of Shandong province of China. More...	Positive

SNP related genes (count: 0)

SNPs in LD with rs424605 (count: 15) View in gBrowse (chr7:138297283..138346565 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²<=0.8.

rs_ID	Functional Annotation	r²[population]
rs385127		0.839[CHB]
rs357382		0.898[CHB]; 0.889[JPT]
rs357456		0.936[CHB]; 0.933[JPT]
rs449239		0.898[CHB]; 0.946[JPT]
rs380650		1.0[CHB]; 1.0[JPT]
rs357437		0.941[CHB]; 0.942[JPT]
rs357427		0.897[CHB]
rs357371	downstream_gene_variant	0.834[JPT]
rs357426		0.933[CHB]
rs60969		0.836[CHB]
rs357435		1.0[CHB]; 1.0[JPT]
rs357429		1.0[CHB]; 0.854[JPT]
rs357432		1.0[CHB]; 0.849[JPT]
rs357372	downstream_gene_variant	0.841[CHB]; 0.834[JPT]
rs447691		1.0[CHB]; 1.0[JPT]

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)