SNP Report

Basic Info

Name	rs411538 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_COX_CTG1:28587668 - 28587668(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.0485224
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000524745); intron_variant(ENST00000530247); non_coding_transcript_exon_variant(ENST00000499525); non_coding_transcript_variant(ENST00000499525, ENST00000530247); upstream_gene_variant(ENST00000452236, ENST00000526291, ENST00000619431, ENST00000619431, ENST00000508341)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SCAND3	zinc finger, BED-type containing 9	6p21.33	Mapped by LD-proxy

SNPs in LD with rs411538 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_COX_CTG1:28587668..28587668 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)