SNP Report

Basic Info

Name	rs3936006 dbSNP Ensembl
Location	chr17:29930642 - 29930642(1)
Variant Alleles	A/G
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.447085
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000423598, ENST00000448319, ENST00000534836, ENST00000536908); NMD_transcript_variant(ENST00000423598); non_coding_transcript_variant(ENST00000534836); upstream_gene_variant(ENST00000269033, ENST00000394848, ENST00000540801, ENST00000577483, ENST00000578411, ENST00000579040, ENST00000579954, ENST00000582084, ENST00000590153)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
EFCAB5	EF-hand calcium binding domain 5	17q11.2	Mapped by Literature SNP
SSH2	slingshot protein phosphatase 2	17q11.2	Mapped by Literature SNP

SNPs in LD with rs3936006 (count: 0) View in gBrowse (chr17:29930642..29930642 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)