BDgene

SNP Report

Basic Info
Name rs3803170 dbSNP Ensembl
Location chr12:111409936 - 111409936(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.464457
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000341259, LRG_621t1)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Glaser, B.,2005(b) G/A For Sample I, allelic association: X2=0, P-value ...... For Sample I, allelic association: X2=0, P-value = 0.96, OR(95%CI)=1(0.7-1.4); genotypic association: X2=8.72, P-value = 0.01 More... Significant association was observed in genotypic associatio...... Significant association was observed in genotypic association. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SH2B3 SH2B adaptor protein 3 12q24.12 Mapped by Literature SNP

SNPs in LD with rs3803170 (count: 0) View in gBrowse (chr12:111409936..111409936 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016