SNP Report

Basic Info

Name	rs35028190 dbSNP Ensembl
Location	chr21:44525765 - 44525765(1)
Variant Alleles	G/C
Ancestral Allele	G
Minor Allele	C
Minor Allele Frequence	0.0181709
Functional Annotation	downstream_gene_variant; intron_variant; missense_variant; non_coding_transcript_variant. Polyphen Annotation: benign(ENST00000323084, ENST00000397916, ENST00000613245, ENST00000614657) SIFT Annotation: tolerated(ENST00000323084, ENST00000397916, ENST00000613245, ENST00000614657)
Consequence to Transcript	downstream_gene_variant(ENST00000354333); intron_variant(ENST00000465978); missense_variant(ENST00000323084, ENST00000397916, ENST00000613245, ENST00000614657); non_coding_transcript_variant(ENST00000465978)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
McQuillin, A., 2006			no P-value no P-value	novel Polymorphisms identified in this study novel Polymorphisms identified in this study	Trend

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
C21orf90	TSPEAR antisense RNA 2	21q22.3	Mapped by Literature SNP
TSPEAR	thrombospondin-type laminin G domain and EAR repeats	21q22.3	Mapped by Literature SNP

SNPs in LD with rs35028190 (count: 0) View in gBrowse (chr21:44525765..44525765 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)