SNP Report

Basic Info

Name	rs3131384 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_SSTO_CTG1:31708638 - 31708638(1)
Variant Alleles	C/G
Ancestral Allele	C
Minor Allele	G
Minor Allele Frequence	0.1248
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; upstream_gene_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000503322); downstream_gene_variant(ENST00000375819, ENST00000375824, ENST00000375825, ENST00000479334, ENST00000495859); upstream_gene_variant(ENST00000383418, ENST00000399142, ENST00000409239, ENST00000450147, ENST00000460663, ENST00000461287, ENST00000430366, ENST00000419389, ENST00000434915, ENST00000445443, ENST00000495989, ENST00000497123, ENST00000430237, ENST00000446610, ENST00000467835, ENST00000491901, ENST00000547421, ENST00000428105, ENST00000420378, ENST00000421590, ENST00000428498, ENST00000467714, ENST00000498546, ENST00000419000, ENST00000453077, ENST00000473930, ENST00000481162, ENST00000550508, ENST00000439683, ENST00000419939, ENST00000440095, ENST00000456155, ENST00000470881, ENST00000492867, ENST00000434670, ENST00000435369, ENST00000488740, ENST00000494970, ENST00000547676, ENST00000455955, ENST00000428121, ENST00000439522, ENST00000444880, ENST00000480025, ENST00000491594, ENST00000419767, ENST00000431644, ENST00000492854, ENST00000495943, ENST00000546405, ENST00000400084, ENST00000383413, ENST00000383415, ENST00000400080, ENST00000470946, ENST00000498587, ENST00000383417, ENST00000443544, ENST00000488047, ENST00000495959, ENST00000548716, ENST00000414847, ENST00000430137, ENST00000434515, ENST00000448386, ENST00000479794, ENST00000483624, ENST00000431420, ENST00000435051, ENST00000466799, ENST00000469626, ENST00000548848)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 4)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
LY6G6C	lymphocyte antigen 6 complex, locus G6C	6p21	Mapped by Literature SNP
LY6G6E	lymphocyte antigen 6 complex, locus G6E (pseudogene)	6p21.3	Mapped by LD-proxy
C6orf25	chromosome 6 open reading frame 25	6p21	Mapped by Literature SNP
LY6G6D	lymphocyte antigen 6 complex, locus G6D	6p21.3	Mapped by Literature SNP

SNPs in LD with rs3131384 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_SSTO_CTG1:31708638..31708638 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)