SNP Report

Basic Info

Name	rs3109469 dbSNP Ensembl
Location	chr3:181175789 - 181175789(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	C
Minor Allele Frequence	0.399561
Functional Annotation	intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000460739, ENST00000469278, ENST00000493116, ENST00000493521, ENST00000597347, ENST00000626948, ENST00000630482); non_coding_transcript_exon_variant(ENST00000461063); non_coding_transcript_variant(ENST00000460739, ENST00000461063, ENST00000469278, ENST00000493116, ENST00000493521, ENST00000597347, ENST00000626948, ENST00000630482)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SOX2-OT	SOX2 overlapping transcript	3q26.33	Mapped by Literature SNP

SNPs in LD with rs3109469 (count: 0) View in gBrowse (chr3:181175789..181175789 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)