BDgene

SNP Report

Basic Info
Name rs2681437 dbSNP Ensembl
Location chr3:152321533 - 152321533(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.0493211
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000282486, ENST00000282488, ENST00000324196, ENST00000324210, ENST00000355460, ENST00000357472, ENST00000459747, ENST00000460591, ENST00000463374, ENST00000464596, ENST00000465907, ENST00000485509, ENST00000485910, ENST00000492948, ENST00000493459, ENST00000495875, ENST00000498502, ENST00000545754)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Hattori, E.,2009 In GWAS: Allelic P-value = 0.07596, Genotypic P-value = 0.00...... In GWAS: Allelic P-value = 0.07596, Genotypic P-value = 0.00752, Recessive P-value = 0.02326, HWE P-value = 0.24735; in Follow-up study: MAF=0.12, Allelic P-value = 0.01926, Allelic Q-value=0.5154, HWE P-value = 0.06182 More... Significant association was observed in both GWAS and Follow...... Significant association was observed in both GWAS and Follow-up study. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
MBNL1 muscleblind-like splicing regulator 1 3q25 1(1/0/0)

SNPs in LD with rs2681437 (count: 0) View in gBrowse (chr3:152321533..152321533 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)