SNP Report

Basic Info

Name	rs2646165 dbSNP Ensembl
Location	chr2:174756754 - 174756754(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	C
Minor Allele Frequence	0.260583
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000261007, ENST00000348749, ENST00000409219, ENST00000409323, ENST00000409542, ENST00000435083, ENST00000442996, ENST00000636168); NMD_transcript_variant(ENST00000435083); non_coding_transcript_variant(ENST00000442996)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CHRNA1	cholinergic receptor, nicotinic, alpha 1 (muscle)	2q31.1	2(0/1/1)

SNPs in LD with rs2646165 (count: 0) View in gBrowse (chr2:174756754..174756754 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)