SNP Report

Basic Info

Name	rs2398820 dbSNP Ensembl
Location	chr9:93234291 - 93234291(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.498602
Functional Annotation	intron_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000297954, ENST00000395477, ENST00000427277, ENST00000432730, ENST00000448039); upstream_gene_variant(ENST00000411624)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Cichon, S.,2011		G	For GWAS, P-value = 0.000017, OR=1.34, for Replication I, P-...... For GWAS, P-value = 0.000017, OR=1.34, for Replication I, P-value = 0.9826, OR=0.99, for combined sample(GWAS+Replication I), P-value = 0.0155, OR=1.1 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
WNK2	WNK lysine deficient protein kinase 2	9q22.3	Mapped by Literature SNP

SNPs in LD with rs2398820 (count: 0) View in gBrowse (chr9:93234291..93234291 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)